Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924395.1_cds_XP_016472755.1_64960
CDS Infomation

[gene=LOC107794744] [db_xref=GeneID:107794744] [protein=AT-rich interactive domain-containing protein 1-like isoform X3] [protein_id=XP_016472755.1] [location=complement(join(26340..27173,31006..31956))] [gbkey=CDS]
Sequence

ATGCTTGGTGATGGGAAGACAGTTGATTTGTGGAAGCTGTACTTAGTTGTGAGGGAGAAA
GGTGGGTACGATAGGGTTTGTAATAGTCGGTCTTGGGGTGTTGTAGCTAAAGAGTGTGGT
TTTGATTCGACTTCCGGTTTGGCTTTGAAGTTGGTATATGTTAAGTATTTAGCTGCATTG
GACAGAGCAATGCTGAGTCTTGAGCAACCTGATAATAATGAAAAGAGTGAGGTTAGGAAG
AGTGGTGCCTCGGGTTTTAGTGGCGTTCGGATGGACCTTGAGCTGGATTTGAAGGAGGTT
TTGATGAAAATTTCTGATGAAAAGAAGAAAGATAAGGTGTATGCAAATATTGACTTGAGC
AATGGTGTTGAGGTTCAGGATTTTGTTGGTTTGGTTAGATGTTCTGAGAATTTCGTTGGA
AAGCAAAGTTTGGACCACAATGATTGTGATGTAAAGGGCATGGATGAAAGAATGAGTGTT
GTCTATGATGAAGAAGACTCGAAGTTTGTGAAAAGAAATGGAGACATTCAACGTGATACA
GATGACATCGGGCTAACAAAGTCTAGTGAGGATGAGGAAGATGGCATTACTAGGAAGAGG
AAGTATAGTGATGAAAAGATGAGCGTCTATTATGATGATGAACAATTGAATTTTGTGAAT
GAAAACGGAGATGTTCAGTGTGGCGGAGATGATATTGGGCTGAGAAAGTCTAGTGGGGAT
GAGGAAGATGGCAGTACTAGGAAGAGGAAGCGAGAGTCTAACTTGGGCATGCTCAAGTGG
GTTACTGAACTTGCAAAGGATCCTTGTGATCCTGCCATTGGACATCTGCCGGAAAGATCT
AAGTGGAAGTCTTATGGGAATGACGTTGTTTGGAAGAAGGTTCTTTTGTTAAGAAAGGAA
ATGGTTTTGGAAAGGAATGTGGATACAAGTACTCAGTACTCCATATGGCAGCACAAACAG
AAAATGCATCCATCTATGTATGATGATAATAGTGGGTCTGAGCGAGTAAGGTGCAGTCAA
AGGGTCGTATCTGCAAAAGATTCTTCGAAAAAGACCCAGCTTTTATCAACAACATCACTA
TCAGCTTCTCATATCAATGAAACTCTGATTGATGGACCTACTGACTCTTCTGCCGAGTCA
GGAGTTTGGTGGAACCGTCGCCGTAAGAAACTAGTATCGATTGGGTCAGAGTTTCAAGCG
GATATTCCAGAATGGAAAAATGACATCTATGAATCTGACTCTAAATGGTTGGGCACCCGA
ATCTGGCCGCTGGATAAAAATGAACAGAACAGAATGTTACTAATCGAAAGAGATCCTGCT
GGGAAAGGAAGGCAAGATACATGTGGCTGTGAATATCCAGGTTCTTTTGACTGCATCAGG
TTTCACCTTTTTGAGAAAACAAGGAAGGTTAAATATGAGCTAGGATCCGCTTTTTATCAC
TGGAAATTTGCCTGCATTGGTGAAAAGGTTGCACTCTCTTGGACAGGAGAAGACCAACAG
AAATTCCACGATATAGTGAAATTGAGCCCTTTGTCTGAGGATGAGAGTTTCAGTTTCTGG
CCTGAACTTTTTAAGGTCTTTCCTCACAAAAGCAGGGAATCTTTGGTGAGCTACTATTTT
AATGTCTTCCTTCTACGGCGAAGAGGTCAGCAGAATAGGATGAATGCAAGTGACATTGAC
AGTGATGATGATGAATCAGGGTGTGGACCTAGGTCTATTTGTTTTGGCCGGGATAAGTTC
TCCATCTTGTGTTCCCCGAAGAAAGCACATCTAGATCCTAAATAG

Peptide Sequence

PEP ID

XP_016472755.1
PEP Infomation

PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X3 [Nicotiana tabacum]
Sequence

MLGDGKTVDLWKLYLVVREKGGYDRVCNSRSWGVVAKECGFDSTSGLALKLVYVKYLAAL
DRAMLSLEQPDNNEKSEVRKSGASGFSGVRMDLELDLKEVLMKISDEKKKDKVYANIDLS
NGVEVQDFVGLVRCSENFVGKQSLDHNDCDVKGMDERMSVVYDEEDSKFVKRNGDIQRDT
DDIGLTKSSEDEEDGITRKRKYSDEKMSVYYDDEQLNFVNENGDVQCGGDDIGLRKSSGD
EEDGSTRKRKRESNLGMLKWVTELAKDPCDPAIGHLPERSKWKSYGNDVVWKKVLLLRKE
MVLERNVDTSTQYSIWQHKQKMHPSMYDDNSGSERVRCSQRVVSAKDSSKKTQLLSTTSL
SASHINETLIDGPTDSSAESGVWWNRRRKKLVSIGSEFQADIPEWKNDIYESDSKWLGTR
IWPLDKNEQNRMLLIERDPAGKGRQDTCGCEYPGSFDCIRFHLFEKTRKVKYELGSAFYH
WKFACIGEKVALSWTGEDQQKFHDIVKLSPLSEDESFSFWPELFKVFPHKSRESLVSYYF
NVFLLRRRGQQNRMNASDIDSDDDESGCGPRSICFGRDKFSILCSPKKAHLDPK

Transcript Sequence

Gene sequence data has not been registered.